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  5. Aev_g05387

Aev_g05387 (TPR5)


Aliases : TPR5

Description : polymerase-II assembly factor *(RPAP3) & original description: none


Gene families : OG0003637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g05387

Target Alias Description ECC score Gene Family Method Actions
Gb_00083 TPR5 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Smo409308 TPR5 RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.02 OrthoFinder output from all 47 species
Zm00001e027561_P001 TPR5, Zm00001e027561 RPAP3 polymerase-II assembly factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 262 294
IPR019734 TPR_repeat 229 257
IPR025986 RPAP3-like_C 419 508
No external refs found!