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  5. AMTR_s00003p00256250

AMTR_s00003p00256250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.313

Description : Santalene and bergamotene synthase, chloroplastic OS=Solanum habrochaites


Gene families : OG0006488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00256250
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Ehy_g30539 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05029 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.02 OrthoFinder output from all 47 species
Gb_13713 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Gb_36202 KS, KS1, ATKS1, ATKS, GA2 Alpha-bisabolene synthase OS=Abies grandis... 0.01 OrthoFinder output from all 47 species
Gb_39616 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.03 OrthoFinder output from all 47 species
Len_g37092 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19537 CPS, ATCPS1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA

No InterPro domains available for this sequence

No external refs found!