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  5. AMTR_s00003p00251710

AMTR_s00003p00251710 (PSB27,...)


Aliases : PSB27, evm_27.TU.AmTr_v1.0_scaffold00003.300

Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb27 protein


Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00251710

Target Alias Description ECC score Gene Family Method Actions
AT1G03600 PSB27 photosystem II family protein 0.04 OrthoFinder output from all 47 species
Ala_g03684 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Ceric.35G049900.1 PSB27, Ceric.35G049900 protein involved in PS-II assembly *(Psb27) & original... 0.02 OrthoFinder output from all 47 species
Cre05.g243800 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g44405 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g19278 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g21560.1 PSB27, LOC_Os03g21560 Psb27 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
MA_388691g0010 PSB27 Psb27 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Mp3g19780.1 PSB27 Psb27 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species
Nbi_g03338 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Solyc07g054290.1.1 PSB27, Solyc07g054290 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Spa_g04006 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.02 OrthoFinder output from all 47 species
Spa_g04007 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Tin_g00234 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e001572_P001 PSB27, Zm00001e001572 Psb27 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Zm00001e038249_P001 PSB27, Zm00001e038249 Psb27 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004806 triglyceride lipase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 75 136
No external refs found!