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  5. Zm00001d021388

Zm00001d021388 (GRMZM2G135651)


Aliases : GRMZM2G135651

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 17 (CNGC17)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d021388
Cluster HCCA cluster: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.03 Gene family
AT5G53130 ATCNGC1, CNGC1 cyclic nucleotide gated channel 1 0.02 Gene family
LOC_Os02g15580 Os02g0255000 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os04g55080 Os04g0643600 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os06g08850 Os06g0188000 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
LOC_Os06g33570 Os06g0527100 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os09g38580 Os09g0558300 34.22 transport.cyclic nucleotide or calcium regulated... 0.07 Gene family
MA_10436286g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Smo113786 PACid_15418666 No description available 0.02 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g007260.3.1 Solyc03g007260.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g098210.3.1 Solyc03g098210.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc06g051920.3.1 Solyc06g051920.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc07g005590.3.1 Solyc07g005590.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc07g006510.3.1 Solyc07g006510.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc08g069140.3.1 Solyc08g069140.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc11g069580.2.1 Solyc11g069580.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc12g010010.2.1 Solyc12g010010.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 79 406
IPR000595 cNMP-bd_dom 501 590
No external refs found!