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  5. AMTR_s00003p00228840

AMTR_s00003p00228840 (UPB1,...)


Aliases : UPB1, evm_27.TU.AmTr_v1.0_scaffold00003.224

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00228840

Target Alias Description ECC score Gene Family Method Actions
AT4G30410 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
Adi_g029675 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42814 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19703 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_14678 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_41387 HLH2, PAR2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g44320.1 LOC_Os06g44320 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_211492g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_218073g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_40267g0020 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_66021g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_8629146g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_884377g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_93614g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_946997g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g05867 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05431 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25869 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41564 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!