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  5. AMTR_s00003p00212990

AMTR_s00003p00212990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.205

Description : Vesicle trafficking.endomembrane trafficking.trans-Golgi-network (TGN) trafficking.ECHIDNA protein


Gene families : OG0003195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003195_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00003p00212990

Target Alias Description ECC score Gene Family Method Actions
Adi_g046374 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Aob_g00689 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Ceric.11G056400.1 Ceric.11G056400 component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.06 OrthoFinder output from all 47 species
Dac_g01913 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Dcu_g45919 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.05 OrthoFinder output from all 47 species
Ehy_g27342 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Gb_34463 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.03 OrthoFinder output from all 47 species
LOC_Os05g06700.1 LOC_Os05g06700 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.03 OrthoFinder output from all 47 species
Len_g00936 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
MA_10435880g0020 No alias ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.02 OrthoFinder output from all 47 species
Ppi_g57350 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010364 No alias component *(ECHIDNA) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Solyc06g073270.4.1 Solyc06g073270 ECHIDNA protein of trans-Golgi-network (TGN) trafficking 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR008564 TVP23-like 14 154
No external refs found!