AMTR_s00003p00190670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.167

Description : Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00190670
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00244080 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.05 OrthoFinder output from all 47 species
AMTR_s00044p00056720 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G52340 SRE1, SIS4,... NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G47130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26760 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G29260 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.04 OrthoFinder output from all 47 species
AT3G51680 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G03140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g015388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g38454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g18596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53375.t1 Aspi01Gene53375 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54448.t1 Aspi01Gene54448 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64386.t1 Aspi01Gene64386 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71695.t1 Aspi01Gene71695 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71697.t1 Aspi01Gene71697 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71700.t1 Aspi01Gene71700 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71705.t1 Aspi01Gene71705 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g70875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G054600.1 Ceric.17G054600 not classified & original description: pacid=50617944... 0.03 OrthoFinder output from all 47 species
Ceric.17G054700.1 Ceric.17G054700 not classified & original description: pacid=50617562... 0.03 OrthoFinder output from all 47 species
Ceric.17G061200.1 Ceric.17G061200 not classified & original description: pacid=50617800... 0.03 OrthoFinder output from all 47 species
Dac_g00544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008067001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.07 OrthoFinder output from all 47 species
GSVIVT01008069001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024621001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01030245001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032999001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033911001 No alias Tropinone reductase-like 1 OS=Erythroxylum coca 0.04 OrthoFinder output from all 47 species
GSVIVT01033913001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033916001 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
GSVIVT01033919001 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_05034 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_07847 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_17570 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_31399 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32338 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_32339 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_36105 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_40683 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_41821 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g18740.1 LOC_Os03g18740 Sex determination protein tasselseed-2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61740.1 LOC_Os03g61740 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
LOC_Os04g10000.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os04g10010.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.08 OrthoFinder output from all 47 species
LOC_Os07g46830.1 LOC_Os07g46830 Secoisolariciresinol dehydrogenase (Fragment)... 0.07 OrthoFinder output from all 47 species
LOC_Os07g46840.1 LOC_Os07g46840 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.07 OrthoFinder output from all 47 species
LOC_Os07g46846.1 LOC_Os07g46846 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46860.1 LOC_Os07g46860 Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46910.1 LOC_Os07g46910 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46920.1 LOC_Os07g46920 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46930.1 LOC_Os07g46930 Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46970.1 LOC_Os07g46970 Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
LOC_Os07g46980.1 LOC_Os07g46980 Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
LOC_Os07g49120.1 LOC_Os07g49120 Sex determination protein tasselseed-2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32030.1 LOC_Os11g32030 Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os12g16010.1 LOC_Os12g16010 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g38241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48178 SRE1, SIS4,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g36394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10120560g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_107740g0010 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_308546g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_57399g0020 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
MA_656745g0010 No alias Tropinone reductase-like 1 OS=Erythroxylum coca... 0.04 OrthoFinder output from all 47 species
MA_97011g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp1g17390.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Mp3g19140.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp3g24700.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 OrthoFinder output from all 47 species
Mp3g24710.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 OrthoFinder output from all 47 species
Mp6g11590.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g13052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28863 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22148 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g43098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0143.g022913 No alias not classified & original description: CDS=1-867 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026191 No alias not classified & original description: CDS=1-561 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0221.g026192 No alias not classified & original description: CDS=60-1013 0.03 OrthoFinder output from all 47 species
Sam_g36265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo415138 No alias Sex determination protein tasselseed-2 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Smo79955 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g005500.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Solyc03g113460.1.1 Solyc03g113460 (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 OrthoFinder output from all 47 species
Solyc10g083170.2.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc10g150150.1.1 Solyc10g150150 Zerumbone synthase OS=Zingiber zerumbet... 0.02 OrthoFinder output from all 47 species
Solyc11g018600.1.1 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g056600.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
Solyc12g056700.2.1 Solyc12g056700 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.06 OrthoFinder output from all 47 species
Zm00001e008424_P001 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e035437_P002 Zm00001e035437 Secoisolariciresinol dehydrogenase (Fragment)... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!