Description : Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00181560 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g25360... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00029p00230160 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.08 | OrthoFinder output from all 47 species | |
AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00061p00035580 | No alias | Pentatricopeptide repeat-containing protein At5g44230... | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00086p00063190 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.07 | OrthoFinder output from all 47 species | |
AMTR_s00276p00017800 | OTP81,... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.05 | OrthoFinder output from all 47 species | |
AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.03 | OrthoFinder output from all 47 species | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g003294 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g005491 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g018291 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g018869 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g036750 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g058970 | RARE1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g066534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g068895 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g099166 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g105531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g06254 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g07311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g07720 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g11535 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g18165 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g20047 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g21708 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g22000 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g24838 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g48664 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07887 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g36547 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g12064 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g27256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g05682 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g16410 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g20429 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g23781 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g27066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g28688 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g33585 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g36477 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g68130 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene27883.t1 | Aspi01Gene27883 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene34804.t1 | Aspi01Gene34804 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene37985.t1 | DOT4, Aspi01Gene37985 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene43851.t1 | Aspi01Gene43851 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Aspi01Gene43949.t2 | OTP84, Aspi01Gene43949 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene71232.t1 | CRR22, Aspi01Gene71232 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0008.g011300 | No alias | not classified & original description: CDS=1-2337 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0022.g016134 | OTP84 | not classified & original description: CDS=1-2358 | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0026.g023333 | CRR22 | not classified & original description: CDS=1-2235 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0058.g034473 | No alias | not classified & original description: CDS=1-2799 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0102.g044571 | No alias | not classified & original description: CDS=1-2829 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.06 | OrthoFinder output from all 47 species | |
Cba_g04727 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g04966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g06836 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g07194 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Cba_g10670 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g11909 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g15366 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g19725 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g20713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g23308 | OSB4 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g26543 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g26795 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g29958 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g36226 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g67060 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g67657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g67766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g67785 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g68679 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g75269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g23468 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dac_g28151 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g44606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g06891 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g08285 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08424 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g30334 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g33764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g47861 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g47882 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dde_g03284 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04853 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dde_g23845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g25197 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g26029 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g29466 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_05554 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_26571 | OTP84 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
Gb_28390 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
Gb_33210 | OTP84 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g60430.1 | LOC_Os01g60430 | RNA editing factor (MEF10) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
Len_g04350 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g04746 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g04805 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g05419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g08128 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g10885 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g12152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g13686 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g18022 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Len_g18533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g18538 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g18873 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g18986 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g18991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g20556 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g21178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g29296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g33284 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Len_g33524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g34161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g40021 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g40128 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g43662 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g44142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g54954 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g04467 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g11358 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g12623 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g15459 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g17576 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g17942 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g19405 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g20567 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g21424 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g23124 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g27086 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g27237 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Msp_g28205 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g29683 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g31349 | CRR22 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Msp_g32947 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g34455 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g41092 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g41095 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Msp_g41276 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g46019 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g48060 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g06876 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g07593 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g20268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g24068 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g05347 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g24441 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g43122 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g44325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g38675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g15709 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g30620 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g03573 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g29582 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g47516 | OTP85 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g53022 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g57671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0032.g010845 | No alias | not classified & original description: CDS=1-381 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g17282 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g17518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19760 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g21944 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g25325 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26489 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g26608 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g36083 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g46633 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g46652 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g082870.1.1 | Solyc04g082870 | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g14323 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g23985 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g30543 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g47167 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g53369 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g26504 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g43745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g44215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003284_P001 | Zm00001e003284 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024311_P001 | Zm00001e024311 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e030887_P001 | Zm00001e030887 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e035764_P001 | Zm00001e035764 | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 522 | 551 |
IPR002885 | Pentatricopeptide_repeat | 218 | 246 |
IPR002885 | Pentatricopeptide_repeat | 248 | 277 |
IPR002885 | Pentatricopeptide_repeat | 116 | 144 |
IPR002885 | Pentatricopeptide_repeat | 280 | 306 |
IPR002885 | Pentatricopeptide_repeat | 356 | 378 |
IPR002885 | Pentatricopeptide_repeat | 381 | 429 |
IPR002885 | Pentatricopeptide_repeat | 147 | 192 |
No external refs found! |