AMTR_s00003p00120050 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.83

Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase

Gene families : OG0000147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00003p00120050

Target	Alias	Description	ECC score	Gene Family Method
AT3G43270	No alias	Plant invertase/pectin methylesterase inhibitor superfamily	0.03	OrthoFinder output from all 47 species
Ala_g32995	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene36658.t1	Aspi01Gene36658	EC_3.1 hydrolase acting on ester bond & original...	0.03	OrthoFinder output from all 47 species
MA_354248g0010	No alias	pectin methylesterase	0.04	OrthoFinder output from all 47 species
Msp_g16008	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ore_g22612	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Pir_g22654	PME1, ATPME1	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Solyc01g099960.4.1	Solyc01g099960	pectin methylesterase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	228	525
IPR006501	Pectinesterase_inhib_dom	29	177

External Links

No external refs found!