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  5. AMTR_s00003p00091000

AMTR_s00003p00091000 (AtSTS, STS,...)


Aliases : AtSTS, STS, evm_27.TU.AmTr_v1.0_scaffold00003.54

Description : Carbohydrate metabolism.raffinose family oligosaccharide biosynthesis.stachyose synthase


Gene families : OG0000999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000999_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00091000

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00092110 AtSTS, STS,... Carbohydrate metabolism.raffinose family oligosaccharide... 0.05 OrthoFinder output from all 47 species
AMTR_s00008p00154720 SIP2, AtSIP2,... Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00147100 SIP1,... Galactinol--sucrose galactosyltransferase OS=Oryza... 0.04 OrthoFinder output from all 47 species
AMTR_s00103p00156250 SIP2, AtSIP2,... Probable galactinol--sucrose galactosyltransferase 2... 0.03 OrthoFinder output from all 47 species
Aev_g08844 SIP2, AtSIP2 alkaline alpha-galactosidase *(SIP2) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21107 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32731 SIP2, AtSIP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004662001 SIP2, AtSIP2 Probable galactinol--sucrose galactosyltransferase 2... 0.05 OrthoFinder output from all 47 species
GSVIVT01034980001 AtSTS, STS Stachyose synthase OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
LOC_Os04g40520.1 SIP2, AtSIP2,... Probable galactinol--sucrose galactosyltransferase 2... 0.02 OrthoFinder output from all 47 species
Pir_g61242 SIP2, AtSIP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 21 845
No external refs found!