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  5. AMTR_s00003p00082280

AMTR_s00003p00082280 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00003.48

No description available


Gene families : OG0004805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00082280

Target Alias Description ECC score Gene Family Method Actions
AT3G06610 No alias DNA-binding enhancer protein-related 0.05 OrthoFinder output from all 47 species
Adi_g080449 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.06 OrthoFinder output from all 47 species
Als_g24598 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70002.t1 Aspi01Gene70002 regulatory component *(HYPK) of NatA/NatE N-terminal... 0.02 OrthoFinder output from all 47 species
Azfi_s0636.g080492 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.04 OrthoFinder output from all 47 species
Ceric.28G004900.1 Ceric.28G004900 regulatory component *(HYPK) of NatA/NatE N-terminal... 0.05 OrthoFinder output from all 47 species
Dcu_g45558 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.04 OrthoFinder output from all 47 species
GSVIVT01034987001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_37891 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_37892 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g61680.1 LOC_Os03g61680 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Lfl_g29035 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.04 OrthoFinder output from all 47 species
MA_140500g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp5g22870.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g08121 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.03 OrthoFinder output from all 47 species
Sam_g09221 No alias regulatory component *(HYPK) of NatA/NatE N-terminal... 0.02 OrthoFinder output from all 47 species
Solyc12g099240.2.1 Solyc12g099240 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005758 mitochondrial intermembrane space IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016531 copper chaperone activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0031970 organelle envelope lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!