AMTR_s00003p00042000 (SAR2, ATSARA1C,...)

Aliases : SAR2, ATSARA1C, ATSAR2, ASAR1, evm_27.TU.AmTr_v1.0_scaffold00003.24

Description : Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.Sar1-type GTPase

Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00003p00042000

Target	Alias	Description	ECC score	Gene Family Method
AT4G02080	SAR2, ATSARA1C,...	secretion-associated RAS super family 2	0.05	OrthoFinder output from all 47 species
Azfi_s0262.g060848	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: CDS=303-884	0.03	OrthoFinder output from all 47 species
Ceric.02G056300.1	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001299.13	SAR1, ATSAR1B,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.02	OrthoFinder output from all 47 species
Ehy_g27076	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g35445	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g32918	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e026263_P001	SAR2, ATSARA1C,...	GTPase (Sar1)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008430	selenium binding	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
MF	GO:0120227	acyl-CoA binding	IEP	HCCA
MF	GO:1901567	fatty acid derivative binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	8	192

External Links

No external refs found!