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  5. AMTR_s00003p00039810

AMTR_s00003p00039810 (PNC1,...)


Aliases : PNC1, evm_27.TU.AmTr_v1.0_scaffold00003.20

Description : Solute transport.carrier-mediated transport.MC-type solute transporter


Gene families : OG0003267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00003p00039810

Target Alias Description ECC score Gene Family Method Actions
Adi_g000510 PNC2 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009846 PNC1 solute transporter *(MTCC) & original description: CDS=422-1411 0.02 OrthoFinder output from all 47 species
GSVIVT01000043001 PNC1 Solute transport.carrier-mediated transport.MC-type... 0.03 OrthoFinder output from all 47 species
Gb_01782 PNC1 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
LOC_Os05g32630.1 PNC1, LOC_Os05g32630 solute transporter (MTCC) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 203 300
IPR018108 Mitochondrial_sb/sol_carrier 8 98
IPR018108 Mitochondrial_sb/sol_carrier 105 187
No external refs found!