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  5. AMTR_s00002p00270520

AMTR_s00002p00270520 (MGP,...)


Aliases : MGP, evm_27.TU.AmTr_v1.0_scaffold00002.587

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00270520

Target Alias Description ECC score Gene Family Method Actions
AT2G02070 IDD5, AtIDD5 indeterminate(ID)-domain 5 0.04 OrthoFinder output from all 47 species
Cba_g72735 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g05659 MGP C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g10682 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_18885 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g39310.1 MGP, LOC_Os07g39310 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
MA_26324g0010 MGP C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Pir_g27424 JKD C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pnu_g12982 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
Solyc09g065670.3.1 MGP, Solyc09g065670 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e003968_P002 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e018716_P001 MGP, Zm00001e018716 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e027791_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e035365_P003 MGP, Zm00001e035365 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 76 99
No external refs found!