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  5. AMTR_s00002p00270370

AMTR_s00002p00270370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.580

Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.p24-beta regulator protein


Gene families : OG0001216 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001216_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: AMTR_s00002p00270370

Target Alias Description ECC score Gene Family Method Actions
AT3G07680 No alias emp24/gp25L/p24 family/GOLD family protein 0.03 OrthoFinder output from all 47 species
Ceric.19G056200.1 Ceric.19G056200 component *(p24-beta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Ceric.19G073800.1 Ceric.19G073800 component *(p24-beta) of GPI-anchor protein cargo... 0.03 OrthoFinder output from all 47 species
Ore_g03792 No alias component *(p24-beta) of GPI-anchor protein cargo... 0.04 OrthoFinder output from all 47 species
Pp3c2_2860V3.1 Pp3c2_2860 emp24/gp25L/p24 family/GOLD family protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021231 No alias component *(p24-beta) of GPI-anchor protein cargo... 0.02 OrthoFinder output from all 47 species
Solyc03g005270.3.1 Solyc03g005270 p24-beta COPI trafficking regulator protein 0.05 OrthoFinder output from all 47 species
Solyc09g082770.3.1 Solyc09g082770 p24-beta COPI trafficking regulator protein 0.05 OrthoFinder output from all 47 species
Zm00001e005646_P001 Zm00001e005646 p24-beta COPI trafficking regulator protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006810 transport IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006915 apoptotic process IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR009038 GOLD_dom 41 214
No external refs found!