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  5. AMTR_s00002p00270090

AMTR_s00002p00270090 (ARLIM15, DMC1,...)


Aliases : ARLIM15, DMC1, ATDMC1, evm_27.TU.AmTr_v1.0_scaffold00002.568

Description : Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)


Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00270090

Target Alias Description ECC score Gene Family Method Actions
Dcu_g45185 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02833 RAD51, ATRAD51 component *(RAD51) of BRCC regulatory deubiquination... 0.02 OrthoFinder output from all 47 species
Tin_g46267 ARLIM15, DMC1, ATDMC1 recombinase *(DMC1) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e020831_P002 ARLIM15, DMC1,... recombinase (DMC1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR013632 DNA_recomb/repair_Rad51_C 83 330
No external refs found!