AMTR_s00002p00269920 (YUC4,...)

Aliases : YUC4, evm_27.TU.AmTr_v1.0_scaffold00002.564

Description : Phytohormones.auxin.synthesis.indole-3-pyruvic acid (IPyA) pathway.YUCCA-type flavin monooxygenase

Gene families : OG0000787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000787_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00269920

Target	Alias	Description	ECC score	Gene Family Method
AT1G21430	YUC11	Flavin-binding monooxygenase family protein	0.03	OrthoFinder output from all 47 species
Aev_g39237	YUC2	flavin-dependent monooxygenase *(YUCCA) & original...	0.04	OrthoFinder output from all 47 species
Dac_g14944	YUC9	flavin-dependent monooxygenase *(YUCCA) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g24967	YUC8	flavin-dependent monooxygenase *(YUCCA) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01011005001	YUC10	Phytohormones.auxin.synthesis.indole-3-pyruvic acid...	0.02	OrthoFinder output from all 47 species
GSVIVT01035678001	YUC6	Phytohormones.auxin.synthesis.indole-3-pyruvic acid...	0.03	OrthoFinder output from all 47 species
Gb_40961	YUC5, SUPER1	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
LOC_Os02g17230.1	YUC10, LOC_Os02g17230	flavin monooxygenase (YUCCA)	0.02	OrthoFinder output from all 47 species
LOC_Os05g45240.1	YUC2, LOC_Os05g45240	flavin monooxygenase (YUCCA)	0.06	OrthoFinder output from all 47 species
Len_g48683	YUC4	flavin-dependent monooxygenase *(YUCCA) & original...	0.04	OrthoFinder output from all 47 species
Ore_g38404	YUC2	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g28857	YUC2	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Sam_g06780	No alias	flavin-dependent monooxygenase *(YUCCA) & original...	0.03	OrthoFinder output from all 47 species
Solyc06g083700.4.1	YUC5, SUPER1,...	flavin monooxygenase (YUCCA)	0.04	OrthoFinder output from all 47 species
Solyc09g064160.3.1	YUC5, SUPER1,...	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
Solyc09g091720.1.1	YUC10, Solyc09g091720	flavin monooxygenase (YUCCA)	0.03	OrthoFinder output from all 47 species
Zm00001e009691_P002	YUC9, Zm00001e009691	flavin monooxygenase (YUCCA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050661	NADP binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0006184	obsolete GTP catabolic process	IEP	HCCA
BP	GO:0008150	biological_process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0045454	cell redox homeostasis	IEP	HCCA
BP	GO:0051258	protein polymerization	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020946	Flavin_mOase-like	29	347

External Links

No external refs found!

AMTR_s00002p00269920 (YUC4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation