AMTR_s00002p00266860 (IAA4, ATAUX2-11,...)

Aliases : IAA4, ATAUX2-11, evm_27.TU.AmTr_v1.0_scaffold00002.514

Description : Auxin-induced protein 22D OS=Vigna radiata var. radiata

Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00002p00266860

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00196100	IAA13,...	Auxin-responsive protein IAA13 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Als_g14126	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g40031	IAA8	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g07142	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g26891	IAA13	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g07439	IAA3, SHY2	transcriptional repressor *(IAA/AUX) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g10795	IAA27, PAP2	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g58375	IAA3, SHY2	transcriptional repressor *(IAA/AUX) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g20460	IAA1, AXR5	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31611	IAA9	transcriptional repressor *(IAA/AUX) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003311	AUX_IAA	11	198

External Links

No external refs found!