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  5. AMTR_s00002p00265420

AMTR_s00002p00265420 (PRA1.F3, PRA8,...)


Aliases : PRA1.F3, PRA8, evm_27.TU.AmTr_v1.0_scaffold00002.497

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GDI displacement factor (GDF) activities.B-G-class Rab-GDF protein


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00265420

Target Alias Description ECC score Gene Family Method Actions
Aop_g01011 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00547 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.29G080600.1 PRA1.B5, Ceric.29G080600 B-G-class Rab-GDF protein & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.39G040500.1 PRA1.B2, Ceric.39G040500 B-G-class Rab-GDF protein & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020828.4 PRA1.G1 Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dac_g08868 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00567 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g01610.1 PRA1.B3, LOC_Os11g01610 B-G-class Rab-GDF protein 0.02 OrthoFinder output from all 47 species
Nbi_g06102 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14850 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10850 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017592 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-558 0.04 OrthoFinder output from all 47 species
Spa_g09655 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32605 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40186 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15611 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g18034 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006824 cobalt ion transport IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0008535 respiratory chain complex IV assembly IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015087 cobalt ion transmembrane transporter activity IEP HCCA
MF GO:0015099 nickel cation transmembrane transporter activity IEP HCCA
BP GO:0015675 nickel cation transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 32 176
No external refs found!