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  5. AMTR_s00002p00263670

AMTR_s00002p00263670 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.481

No description available


Gene families : OG0006644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00263670
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT3G04650 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
Ala_g12977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G000600.1 Ceric.24G000600 not classified & original description: pacid=50629566... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40540.1 LOC_Os12g40540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g15460.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g15264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003142_P002 Zm00001e003142 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!