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  5. AMTR_s00002p00263250

AMTR_s00002p00263250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.476

Description : Cytoskeleton.microtubular network.microtubule dynamics.WDL microtubule-stabilizing factor


Gene families : OG0000418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00263250

Target Alias Description ECC score Gene Family Method Actions
AT2G25480 No alias TPX2 (targeting protein for Xklp2) protein family 0.04 OrthoFinder output from all 47 species
AT4G32330 No alias TPX2 (targeting protein for Xklp2) protein family 0.05 OrthoFinder output from all 47 species
Adi_g059112 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g097977 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g35230 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g25469 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Als_g05641 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Als_g32683 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Aob_g32079 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Aop_g12096 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11565.t1 Aspi01Gene11565 microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32489.t1 Aspi01Gene32489 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013383 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0099.g044176 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g07694 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g22186 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g11501 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g13552 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Gb_12105 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Len_g01303 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
MA_20109g0010 No alias microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
MA_46848g0010 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Msp_g09168 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Msp_g13406 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g05796 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g24171 No alias microtubule-stabilizing factor *(WDL) & original... 0.06 OrthoFinder output from all 47 species
Pir_g18861 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g28684 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g18949 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g49912 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g066030.4.1 Solyc06g066030 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Solyc08g059800.3.1 Solyc08g059800 microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
Spa_g21201 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g29240 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g30104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47611 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Tin_g13057 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 250 306
No external refs found!