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  5. AMTR_s00002p00255260

AMTR_s00002p00255260 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.391

No description available


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00255260

Target Alias Description ECC score Gene Family Method Actions
AT5G24790 No alias Protein of unknown function, DUF599 0.02 OrthoFinder output from all 47 species
Als_g24761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25945.t1 Aspi01Gene25945 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51507.t2 Aspi01Gene51507 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1197.g099364 No alias not classified & original description: CDS=1-918 0.02 OrthoFinder output from all 47 species
Ceric.19G050500.1 Ceric.19G050500 not classified & original description: pacid=50575123... 0.05 OrthoFinder output from all 47 species
Ceric.19G050900.1 Ceric.19G050900 not classified & original description: pacid=50576570... 0.05 OrthoFinder output from all 47 species
Ehy_g17770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g49030.1 LOC_Os01g49030 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g32100.1 LOC_Os09g32100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g05628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_879701g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g29421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g31363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g040460.2.1 Solyc12g040460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g10500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 10 227
No external refs found!