1. Home
  2. Species
  3. Angiopteris evecta
  4. Sequence
  5. Aev_g05319

Aev_g05319 (RPT4A)


Aliases : RPT4A

Description : regulatory component *(RPT4) of 26S proteasome & original description: none


Gene families : OG0004670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004670_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g05319

Target Alias Description ECC score Gene Family Method Actions
AT1G45000 No alias AAA-type ATPase family protein 0.02 OrthoFinder output from all 47 species
AT5G43010 RPT4A regulatory particle triple-A ATPase 4A 0.02 OrthoFinder output from all 47 species
Als_g09965 No alias regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g08467 No alias regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.6 No alias Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Cre17.g710150 No alias Protein degradation.26S proteasome.regulatory... 0.06 OrthoFinder output from all 47 species
Dcu_g05442 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01023828001 No alias Protein degradation.26S proteasome.regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os02g10640.1 LOC_Os02g10640 regulatory component RPT4 of 26S proteasome 0.04 OrthoFinder output from all 47 species
LOC_Os06g40560.1 LOC_Os06g40560 regulatory component RPT4 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Len_g03228 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
MA_137771g0010 No alias regulatory component RPT4 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Mp7g14270.1 No alias regulatory component RPT4 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Ore_g06165 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007731 No alias regulatory component *(RPT4) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Smo171164 RPT4A Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Solyc01g109940.3.1 Solyc01g109940 regulatory component RPT4 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Spa_g06890 No alias regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Tin_g16778 RPT4A regulatory component *(RPT4) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Zm00001e014032_P001 Zm00001e014032 regulatory component RPT4 of 26S proteasome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 175 308
IPR032501 Prot_ATP_ID_OB_C 62 117
IPR041569 AAA_lid_3 331 373
No external refs found!