- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.148
Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana
Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G44710 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g09626 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g25318 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32982 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14895 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07409 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22649 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g28877 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03583 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04897 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene31132.t1 | Aspi01Gene31132 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05308 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g13057 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g31778 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G033700.1 | Ceric.03G033700 | not classified & original description: pacid=50572646... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G058800.1 | Ceric.04G058800 | not classified & original description: pacid=50631350... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g16369 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01827 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g10166 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015774001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018314001 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14149 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_26190 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g45930.3 | LOC_Os04g45930 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g08570.1 | LOC_Os10g08570 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09447 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10280 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10424 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g06685 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g38057 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10436637g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10436637g0030 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_169053g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_8142g0020 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_92056g0010 | No alias | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48146 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g02437 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18521 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ore_g38066 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g39004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44161 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g28565 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g18966 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g21786 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g25435 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g22231 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g52292 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g52296 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35273 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g088800.4.1 | Solyc01g088800 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g062180.2.1 | Solyc10g062180 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g062340.2.1 | Solyc10g062340 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g15243 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47784 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g08252 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12919 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e012880_P004 | Zm00001e012880 | Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| BP | GO:0006551 | leucine metabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | HCCA |
| BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009098 | leucine biosynthetic process | IEP | HCCA |
| MF | GO:0046912 | acyltransferase activity, acyl groups converted into alkyl on transfer | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| No external refs found! |