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Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.61
Description : Protein YLS3 OS=Arabidopsis thaliana
Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00240480 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00225010 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18280 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G14815 | No alias | Bifunctional inhibitor/lipid-transfer protein/seed... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene12060.t1 | Aspi01Gene12060 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene13486.t1 | Aspi01Gene13486 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29219.t1 | Aspi01Gene29219 | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33061.t1 | Aspi01Gene33061 | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene44733.t1 | Aspi01Gene44733 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene50807.t1 | Aspi01Gene50807 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033619 | No alias | not classified & original description: CDS=1-465 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0803.g087563 | No alias | arabinogalactan protein *(Xylogen) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g15255 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g37270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11056 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001178001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01001181001 | EDA4 | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008272001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018010001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029796001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_16233 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_24349 | No alias | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g59870.1 | LOC_Os01g59870 | xylogen-type arabinogalactan protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g47200.1 | LOC_Os06g47200 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g49770.1 | LOC_Os06g49770 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g37280.1 | LOC_Os11g37280 | Non-specific lipid-transfer protein C6 OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g37455 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10434155g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_113140g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_115537g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_1925g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_19325g0010 | No alias | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| MA_494876g0010 | No alias | xylogen-type arabinogalactan protein | 0.04 | OrthoFinder output from all 47 species | |
| MA_50191g0010 | No alias | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
| MA_64802g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_71069g0010 | No alias | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| MA_76307g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_9903145g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g06695 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g44457 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008667 | No alias | not classified & original description: CDS=1-402 | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014600 | No alias | not classified & original description: CDS=65-802 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014611 | No alias | arabinogalactan protein *(Xylogen) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017064 | No alias | arabinogalactan protein *(Xylogen) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0169.g024327 | No alias | not classified & original description: CDS=1-432 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g105010.3.1 | Solyc01g105010 | xylogen-type arabinogalactan protein | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g119620.1.1 | Solyc03g119620 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g007460.3.1 | Solyc08g007460 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g082270.4.1 | Solyc09g082270 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g072030.3.1 | Solyc11g072030 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11499 | No alias | arabinogalactan protein *(Xylogen) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006054_P001 | Zm00001e006054 | xylogen-type arabinogalactan protein | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e011462_P001 | Zm00001e011462 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038813_P001 | Zm00001e038813 | xylogen-type arabinogalactan protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016140 | Bifunc_inhib/LTP/seed_store | 16 | 107 |
| No external refs found! |