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  5. AMTR_s00002p00097480

AMTR_s00002p00097480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.55

Description : Cytoskeleton.microfilament network.actin polymerisation.formin actin filament elongation factor activities.group-I formin


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00097480

Target Alias Description ECC score Gene Family Method Actions
AT2G43800 No alias Actin-binding FH2 (formin homology 2) family protein 0.09 OrthoFinder output from all 47 species
AT3G05470 No alias Actin-binding FH2 (formin homology 2) family protein 0.05 OrthoFinder output from all 47 species
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.04 OrthoFinder output from all 47 species
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.03 OrthoFinder output from all 47 species
AT5G48360 No alias Actin-binding FH2 (formin homology 2) family protein 0.09 OrthoFinder output from all 47 species
Dcu_g04990 ATFH5, Fh5 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031126001 No alias Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
GSVIVT01038194001 No alias Cytoskeleton.microfilament network.actin... 0.06 OrthoFinder output from all 47 species
Gb_11092 ATFH5, Fh5 group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g34180.1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.05 OrthoFinder output from all 47 species
MA_21083g0010 FH6, ATFH6 group-I formin actin filament elongation factor 0.01 OrthoFinder output from all 47 species
Mp5g03400.1 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Mp8g08720.1 ATFH5, Fh5 group-I formin actin filament elongation factor.... 0.02 OrthoFinder output from all 47 species
Msp_g15477 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Ppi_g56831 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.01 OrthoFinder output from all 47 species
Solyc01g099650.3.1 Solyc01g099650 group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Solyc02g092470.3.1 FH6, ATFH6,... group-I formin actin filament elongation factor 0.04 OrthoFinder output from all 47 species
Solyc12g019480.3.1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e004155_P001 Zm00001e004155 group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Zm00001e012597_P001 FH6, ATFH6,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0007090 obsolete regulation of S phase of mitotic cell cycle IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 545 931
No external refs found!