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  5. AMTR_s00002p00085090

AMTR_s00002p00085090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.41

Description : Transcription factor SCREAM2 OS=Arabidopsis thaliana


Gene families : OG0001330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00085090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00184p00048850 bHLH093,... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AT1G12860 SCRM2, ICE2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Ala_g04435 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g17032 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05040 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03868.t1 SCRM2, ICE2,... transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010652 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-1947 0.01 OrthoFinder output from all 47 species
Azfi_s0560.g076949 SCRM2, ICE2 transcription factor *(ICE1/2) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g16909 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008305001 bHLH093 RNA biosynthesis.transcriptional activation.bHLH... 0.09 OrthoFinder output from all 47 species
MA_12807g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_448849g0010 ATICE1, ICE1, SCRM transcription factor (bHLH). transcription factor (ICE1|2) 0.05 OrthoFinder output from all 47 species
Msp_g13280 ATICE1, ICE1, SCRM transcription factor *(ICE1/2) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33626 bHLH093 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001696 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-2049 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002409 SCRM2, ICE2 bHLH-type transcription factor & original description: CDS=1-732 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026391 SCRM2, ICE2 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Solyc02g091690.3.1 bHLH093, Solyc02g091690 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Tin_g08227 SCRM2, ICE2 transcription factor *(ICE1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021526_P001 ATICE1, ICE1,... transcription factor (bHLH). transcription factor (ICE1|2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!