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  5. AMTR_s00002p00062890

AMTR_s00002p00062890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00002.26

No description available


Gene families : OG0006078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00002p00062890
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G63810 No alias CONTAINS InterPro DOMAIN/s: Nrap protein... 0.03 OrthoFinder output from all 47 species
Dcu_g25897 No alias pre-40S ribosomal subunit assembly factor *(UTP22) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01018952001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_07104 No alias pre-40S ribosomal subunit assembly factor (UTP22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0071203 WASH complex IEP HCCA
InterPro domains Description Start Stop
IPR005554 NOL6/Upt22 79 1010
No external refs found!