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  5. AMTR_s00001p00273100

AMTR_s00001p00273100 (CYP40, SQN,...)


Aliases : CYP40, SQN, evm_27.TU.AmTr_v1.0_scaffold00001.594

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst


Gene families : OG0004698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00273100

Target Alias Description ECC score Gene Family Method Actions
Als_g04292 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015659 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: CDS=1-1317 0.05 OrthoFinder output from all 47 species
Azfi_s0179.g056274 HCT EC_5.2 cis-trans-isomerase & original description: CDS=141-914 0.02 OrthoFinder output from all 47 species
Cba_g68166 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07407 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03738 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06290 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010095 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: CDS=5-1111 0.03 OrthoFinder output from all 47 species
Spa_g22188 CYP40, SQN EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030817_P001 CYP40, SQN,... protein folding catalyst 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 8 171
IPR001440 TPR_1 298 331
No external refs found!