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  5. AMTR_s00001p00272840

AMTR_s00001p00272840 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.568

Description : TIP41-like protein OS=Arabidopsis thaliana


Gene families : OG0006402 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006402_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272840
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g55270.1 LOC_Os03g55270 TIP41-like protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g15850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0042255 ribosome assembly IEP HCCA
BP GO:0042256 cytosolic ribosome assembly IEP HCCA
CC GO:0042579 microbody IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR007303 TIP41-like 13 210
No external refs found!