1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00272590

AMTR_s00001p00272590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.543

Description : Ribosomal protein S3, mitochondrial OS=Petunia hybrida


Gene families : OG0009011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009011_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00272590

Target Alias Description ECC score Gene Family Method Actions
ATMG00090 No alias structural constituent of ribosome;protein binding 0.04 OrthoFinder output from all 47 species
Aev_g20617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51885 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_13807 No alias Ribosomal protein S3, mitochondrial OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Lfl_g38544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08984 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g045826.1.1 Solyc05g045826 Ribosomal protein S3, mitochondrial OS=Petunia hybrida... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001351 Ribosomal_S3_C 210 293
No external refs found!