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  5. AMTR_s00001p00271570

AMTR_s00001p00271570 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.492

Description : Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica


Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00271570

Target Alias Description ECC score Gene Family Method Actions
Adi_g022145 APRR9, TL1, PRR9 circAdian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Cba_g16099 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.04 OrthoFinder output from all 47 species
Dac_g07382 PRR3, APRR3 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Dac_g11551 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.02 OrthoFinder output from all 47 species
GSVIVT01032644001 APRR7, PRR7 Multi-process regulation.circadian clock.PRR... 0.03 OrthoFinder output from all 47 species
LOC_Os09g36220.1 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.03 OrthoFinder output from all 47 species
Msp_g23929 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
Ore_g13226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g081240.3.1 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.03 OrthoFinder output from all 47 species
Solyc10g086000.3.1 APRR7, PRR7,... PRR circadian clock time-of-day-dependent expressed repressor 0.03 OrthoFinder output from all 47 species
Tin_g20544 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0018298 obsolete protein-chromophore linkage IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 278 321
No external refs found!