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  5. AMTR_s00001p00270240

AMTR_s00001p00270240 (CPSRP43, CAO,...)


Aliases : CPSRP43, CAO, evm_27.TU.AmTr_v1.0_scaffold00001.459

Description : Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component


Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00270240

Target Alias Description ECC score Gene Family Method Actions
AT2G47450 CPSRP43, CAO chloroplast signal recognition particle component (CAO) 0.03 OrthoFinder output from all 47 species
Als_g00847 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Ceric.38G054000.1 CPSRP43, CAO,... component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03990.1 CPSRP43, CAO,... component cpSRP43 of thylakoid membrane SRP insertion system 0.07 OrthoFinder output from all 47 species
MA_845170g0010 No alias component cpSRP43 of thylakoid membrane SRP insertion system 0.02 OrthoFinder output from all 47 species
Mp2g09760.1 CPSRP43, CAO component cpSRP43 of thylakoid membrane SRP insertion system 0.02 OrthoFinder output from all 47 species
Nbi_g12193 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Ore_g41563 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Pir_g42453 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Solyc02g087400.1.1 CPSRP43, CAO,... component cpSRP43 of thylakoid membrane SRP insertion system 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023780 Chromo_domain 273 318
IPR023780 Chromo_domain 326 371
IPR020683 DUF3447 177 238
No external refs found!