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  5. AMTR_s00001p00269430

AMTR_s00001p00269430 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.439

Description : Probable carboxylesterase 8 OS=Arabidopsis thaliana


Gene families : OG0000050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00269430
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT1G49650 No alias alpha/beta-Hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g09615 ATGID1C, GID1C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13456 CXE20, AtCXE20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04784 AtCXE18, CXE18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14155 ATGID1C, GID1C not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g24858 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09234.t1 Aspi01Gene09234 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15776.t1 Aspi01Gene15776 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene15778.t1 Aspi01Gene15778 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61085.t1 AtCXE18, CXE18,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010277 AtCXE18, CXE18 not classified & original description: CDS=168-1427 0.04 OrthoFinder output from all 47 species
Dcu_g02483 CXE17, AtCXE17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13496 AtCXE18, CXE18 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g23293 AtCXE18, CXE18 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07801 ATGID1C, GID1C Gibberellin receptor GID1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_23204 CXE17, AtCXE17 Probable carboxylesterase 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39438 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os03g57630.1 LOC_Os03g57630 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g06840.1 LOC_Os07g06840 Probable carboxylesterase 15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g43430.1 LOC_Os08g43430 Probable carboxylesterase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28630.1 ATCXE12, CXE12,... Tuliposide A-converting enzyme 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os09g28640.1 ATCXE12, CXE12,... Tuliposide A-converting enzyme 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g29270 AtCXE18, CXE18 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437184g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_269822g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_28455g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_384628g0010 CXE13, ATCXE13 Tuliposide A-converting enzyme 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
MA_81147g0010 CXE13, ATCXE13 Tuliposide A-converting enzyme 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_93044g0010 AtCXE18, CXE18 Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g30573 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15651 CXE17, AtCXE17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011438 ATGID1C, GID1C gibberellin receptor *(GID1) & original description: CDS=124-1194 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0275.g027054 AtCXE18, CXE18 not classified & original description: CDS=649-1746 0.03 OrthoFinder output from all 47 species
Tin_g10563 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Zm00001e034362_P001 ATCXE12, CXE12,... 2-hydroxyisoflavanone dehydratase OS=Glycyrrhiza... 0.02 OrthoFinder output from all 47 species
Zm00001e035704_P001 AtCXE18, CXE18,... Probable carboxylesterase 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008152 metabolic process IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013094 AB_hydrolase_3 85 287
No external refs found!