AMTR_s00001p00264520 (KNAT7, IXR11,...)


Aliases : KNAT7, IXR11, evm_27.TU.AmTr_v1.0_scaffold00001.399

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00264520

Target Alias Description ECC score Gene Family Method Actions
Aev_g46456 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49428.t1 KNAT3, Aspi01Gene49428 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g03770.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Ore_g25530 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17826 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g100510.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR005541 KNOX2 75 127
IPR008422 Homeobox_KN_domain 222 261
IPR005540 KNOX1 13 56
IPR005539 ELK_dom 182 203
No external refs found!