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  5. AMTR_s00001p00259880

AMTR_s00001p00259880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.368

Description : Cytoskeleton.microtubular network.microtubule dynamics.SPR1 microtubule-stabilizing factor


Gene families : OG0001361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00259880
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT1G26355 SP1L1 SPIRAL1-like1 0.03 OrthoFinder output from all 47 species
AT4G23496 SP1L5 SPIRAL1-like5 0.04 OrthoFinder output from all 47 species
Adi_g015531 SP1L1 microtubule plus-end-tracking protein *(SPR1) & original... 0.02 OrthoFinder output from all 47 species
Aev_g42265 SP1L2 microtubule plus-end-tracking protein *(SPR1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05835.t1 SP1L2, Aspi01Gene05835 microtubule plus-end-tracking protein *(SPR1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10472 SP1L2 microtubule plus-end-tracking protein *(SPR1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019404001 SP1L5 Cytoskeleton.microtubular network.microtubule... 0.06 OrthoFinder output from all 47 species
LOC_Os04g48870.1 SP1L2, LOC_Os04g48870 MT plus-end-tracking protein (SPR1) 0.04 OrthoFinder output from all 47 species
LOC_Os11g41150.1 SP1L2, LOC_Os11g41150 MT plus-end-tracking protein (SPR1) 0.03 OrthoFinder output from all 47 species
Lfl_g29902 SP1L2 microtubule plus-end-tracking protein *(SPR1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g36099 SP1L1 microtubule plus-end-tracking protein *(SPR1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g04305 SP1L2 microtubule plus-end-tracking protein *(SPR1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g25453 SP1L1 microtubule plus-end-tracking protein *(SPR1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g04828 SP1L2 microtubule plus-end-tracking protein *(SPR1) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e021134_P001 SP1L1, Zm00001e021134 MT plus-end-tracking protein (SPR1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030288 outer membrane-bounded periplasmic space IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042597 periplasmic space IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!