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  5. AMTR_s00001p00254210

AMTR_s00001p00254210 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.332

No description available


Gene families : OG0004219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00254210

Target Alias Description ECC score Gene Family Method Actions
AT3G61480 No alias Quinoprotein amine dehydrogenase, beta chain-like;... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000787 No alias not classified & original description: CDS=268-3795 0.05 OrthoFinder output from all 47 species
LOC_Os02g54500.1 LOC_Os02g54500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g20773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g05920.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g05457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75259 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g094880.3.1 Solyc01g094880 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e023736_P002 Zm00001e023736 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR009771 Ribosome_control_1 676 932
No external refs found!