AMTR_s00001p00244480 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.289

Description : Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (LHT-type)


Gene families : OG0003545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003545_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00244480

Target Alias Description ECC score Gene Family Method Actions
Adi_g006430 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05213 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38798 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19490 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12161 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25615 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023906001 No alias Solute transport.carrier-mediated transport.APC... 0.06 OrthoFinder output from all 47 species
Gb_34431 No alias amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Gb_34432 No alias amino acid transporter (LHT) 0.04 OrthoFinder output from all 47 species
Mp1g29260.1 No alias amino acid transporter (LHT) 0.02 OrthoFinder output from all 47 species
Msp_g11633 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11797 No alias amino acid transporter *(LHT) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g26639 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20071 No alias amino acid transporter *(LHT) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04722 No alias amino acid transporter *(LHT) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0124.g021601 No alias amino acid transporter *(LHT) & original description:... 0.03 OrthoFinder output from all 47 species
Solyc01g111980.3.1 Solyc01g111980 amino acid transporter (LHT) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003933 GTP cyclohydrolase activity IEP HCCA
MF GO:0003935 GTP cyclohydrolase II activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019238 cyclohydrolase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 172 583
No external refs found!