1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00242250

AMTR_s00001p00242250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.279

Description : Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase


Gene families : OG0000622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00242250
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00225360 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
AT2G28305 LOG1, ATLOG1 Putative lysine decarboxylase family protein 0.04 OrthoFinder output from all 47 species
AT2G35990 No alias Putative lysine decarboxylase family protein 0.03 OrthoFinder output from all 47 species
AT5G06300 No alias Putative lysine decarboxylase family protein 0.09 OrthoFinder output from all 47 species
AT5G26140 LOG9, ATLOG9 Putative lysine decarboxylase family protein 0.06 OrthoFinder output from all 47 species
Ala_g03118 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.05 OrthoFinder output from all 47 species
Ala_g16983 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Ala_g23132 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Als_g00402 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Als_g52625 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Aop_g11004 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene26320.t1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30015.t1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69230.t1 Aspi01Gene69230 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036541 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Cba_g06909 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Cba_g22041 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Ceric.35G020400.1 Ceric.35G020400 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Dac_g09420 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g31708 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01009880001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
GSVIVT01023920001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Gb_08598 LOG1, ATLOG1 cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Gb_18238 No alias Cytokinin riboside 5-monophosphate phosphoribohydrolase... 0.07 OrthoFinder output from all 47 species
Gb_24266 LOG1, ATLOG1 cytokinin phosphoribohydrolase 0.08 OrthoFinder output from all 47 species
Gb_31493 LOG1, ATLOG1 cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
LOC_Os05g51390.1 LOC_Os05g51390 cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
Len_g02595 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g10038 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g18234 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
MA_47673g0010 No alias cytokinin phosphoribohydrolase 0.06 OrthoFinder output from all 47 species
Msp_g46678 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g00449 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12636 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Pir_g30036 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0222.g026229 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Smo412786 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Solyc06g075090.4.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.05 OrthoFinder output from all 47 species
Solyc10g084150.2.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
Spa_g00319 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Spa_g54738 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e020007_P001 Zm00001e020007 cytokinin phosphoribohydrolase 0.05 OrthoFinder output from all 47 species
Zm00001e020557_P003 Zm00001e020557 cytokinin phosphoribohydrolase 0.05 OrthoFinder output from all 47 species
Zm00001e034938_P001 Zm00001e034938 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005269 LOG 55 185
No external refs found!