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  5. AMTR_s00001p00239750

AMTR_s00001p00239750 (OPCL1,...)


Aliases : OPCL1, evm_27.TU.AmTr_v1.0_scaffold00001.272

Description : Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00239750

Target Alias Description ECC score Gene Family Method Actions
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
AT5G63380 No alias AMP-dependent synthetase and ligase family protein 0.06 OrthoFinder output from all 47 species
Adi_g015908 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29974 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g62425 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.03 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.02 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01001827001 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_04708 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_19726 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Lfl_g23512 OPCL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10426784g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Nbi_g01073 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17189 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 506 531
IPR000873 AMP-dep_Synth/Lig_com 62 466
No external refs found!