1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00206080

AMTR_s00001p00206080 (ATBCAT-3, BCAT3,...)


Aliases : ATBCAT-3, BCAT3, evm_27.TU.AmTr_v1.0_scaffold00001.209

Description : Amino acid metabolism.degradation.branched-chain amino acid.BCAT branched-chain aminotransferase


Gene families : OG0001757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001757_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00206080

Target Alias Description ECC score Gene Family Method Actions
AT1G10070 BCAT-2, ATBCAT-2 branched-chain amino acid transaminase 2 0.03 OrthoFinder output from all 47 species
Adi_g085568 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56382.t1 ATBCAT-3, BCAT3,... EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
Cba_g00897 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009276001 BCAT-2, ATBCAT-2 Amino acid metabolism.degradation.branched-chain amino... 0.04 OrthoFinder output from all 47 species
Msp_g37425 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.04 OrthoFinder output from all 47 species
Nbi_g00928 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Pnu_g24043 ATBCAT-3, BCAT3 EC_2.6 transferase transferring nitrogenous group &... 0.02 OrthoFinder output from all 47 species
Solyc04g077250.4.1 BCAT-2,... valine/leucine/isoleucine aminotransferase.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0008152 metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0048037 obsolete cofactor binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001544 Aminotrans_IV 83 302
No external refs found!