AMTR_s00001p00190810 (LGT1, GAUT1,...)


Aliases : LGT1, GAUT1, evm_27.TU.AmTr_v1.0_scaffold00001.189

Description : Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7 galacturonosyltransferase complex.GAUT1 component


Gene families : OG0000136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00190810
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AT2G38650 GAUT7, LGT7 galacturonosyltransferase 7 0.03 OrthoFinder output from all 47 species
Adi_g011652 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aev_g01406 GAUT13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05576 GAUT11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14763 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
Aop_g62565 GAUT8, QUA1 glycosyltransferase (QUA1) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Dcu_g34317 GAUT13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027574001 LGT1, GAUT1 Cell wall.pectin.homogalacturonan.synthesis.GAUT1:GAUT7... 0.03 OrthoFinder output from all 47 species
Gb_12937 GAUT11 Probable galacturonosyltransferase 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os06g49810.1 LGT1, GAUT1,... component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species
Lfl_g16379 LGT1, GAUT1 component *(GAUT1) of GAUT1:GAUT7... 0.02 OrthoFinder output from all 47 species
MA_5732482g0010 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Smo111745 GAUT8, QUA1 Galacturonosyltransferase 8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo268781 GAUT13 Probable galacturonosyltransferase 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g093970.4.1 LGT1, GAUT1,... component GAUT1 of GAUT1:GAUT7 galacturonosyltransferase complex 0.04 OrthoFinder output from all 47 species
Solyc04g015270.3.1 GAUT4, Solyc04g015270 Probable galacturonosyltransferase 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e010987_P002 GAUT7, LGT7,... component GAUT7 of GAUT1:GAUT7 galacturonosyltransferase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 375 657
No external refs found!