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  5. AMTR_s00001p00185010

AMTR_s00001p00185010 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.179

Description : Probable methyltransferase PMT27 OS=Arabidopsis thaliana


Gene families : OG0000974 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00185010
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G29470 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.02 OrthoFinder output from all 47 species
Adi_g059056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17246 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12952 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27138.t1 Aspi01Gene27138 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0019.g015100 No alias not classified & original description: CDS=38-2224 0.03 OrthoFinder output from all 47 species
Cba_g22725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19630 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008776001 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018844001 No alias Probable methyltransferase PMT27 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01032763001 No alias Probable methyltransferase PMT23 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_34663 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g61250.1 LOC_Os01g61250 Probable methyltransferase PMT23 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g56380.1 LOC_Os03g56380 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os11g08314.1 LOC_Os11g08314 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Len_g07789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g44638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003626 No alias not classified & original description: CDS=40-2169 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0772.g027686 No alias not classified & original description: CDS=302-2431 0.03 OrthoFinder output from all 47 species
Sam_g10468 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo170677 No alias Probable methyltransferase PMT26 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc04g063230.3.1 Solyc04g063230 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g051000.2.1 Solyc06g051000 Probable methyltransferase PMT22 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Spa_g10352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g15041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005847_P001 Zm00001e005847 Probable methyltransferase PMT28 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e008978_P001 Zm00001e008978 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e018407_P001 Zm00001e018407 Probable methyltransferase PMT26 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e027288_P002 Zm00001e027288 Probable methyltransferase PMT23 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e030186_P002 Zm00001e030186 Probable methyltransferase PMT27 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 401 906
No external refs found!