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  5. AMTR_s00001p00178790

AMTR_s00001p00178790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.172

No description available


Gene families : OG0000676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00178790

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G19430 No alias late embryogenesis abundant protein-related / LEA protein-related 0.05 OrthoFinder output from all 47 species
AT4G27400 No alias Late embryogenesis abundant (LEA) protein-related 0.03 OrthoFinder output from all 47 species
AT5G54370 No alias Late embryogenesis abundant (LEA) protein-related 0.02 OrthoFinder output from all 47 species
AT5G60530 No alias late embryogenesis abundant protein-related / LEA protein-related 0.03 OrthoFinder output from all 47 species
Als_g21227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g51912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00812 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g29247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26366 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_38738 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g73700.1 LOC_Os01g73700 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g73710.1 LOC_Os01g73710 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73720.1 LOC_Os01g73720 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g73730.1 LOC_Os01g73730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g01680.1 LOC_Os05g01680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g47940.1 LOC_Os05g47940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g05360.1 LOC_Os11g05360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_6771381g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_74876g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g03490.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g24052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107710.2.1 Solyc01g107710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g107720.3.1 Solyc01g107720 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc02g078930.3.1 Solyc02g078930 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc06g034130.2.1 Solyc06g034130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g069280.2.1 Solyc11g069280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g073140.2.1 Solyc11g073140 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g073150.1.1 Solyc11g073150 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g37296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002062_P001 Zm00001e002062 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018525_P001 Zm00001e018525 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e018526_P001 Zm00001e018526 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e018527_P001 Zm00001e018527 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e021386_P001 Zm00001e021386 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024129_P001 Zm00001e024129 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028269_P001 Zm00001e028269 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e029686_P001 Zm00001e029686 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009646 Root_cap 169 225
No external refs found!