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  5. AMTR_s00001p00171160

AMTR_s00001p00171160 (MSL6,...)


Aliases : MSL6, evm_27.TU.AmTr_v1.0_scaffold00001.159

Description : Solute transport.channels.MSL mechanosensitive ion channel


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00171160
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT2G17000 No alias Mechanosensitive ion channel family protein 0.02 OrthoFinder output from all 47 species
Als_g15328 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G100600.1 MSL6, Ceric.02G100600 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g40507 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01023959001 MSL4 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01023963001 MSL6 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
Solyc08g061980.4.1 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 670 875
No external refs found!