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  5. AMTR_s00001p00147850

AMTR_s00001p00147850 (ATCDSP32, CDSP32,...)


Aliases : ATCDSP32, CDSP32, evm_27.TU.AmTr_v1.0_scaffold00001.130

Description : Thioredoxin-like protein CDSP32, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0006806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006806_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00147850

Target Alias Description ECC score Gene Family Method Actions
Adi_g078630 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g03977 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11787 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03601 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22724 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15470 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g12372 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22593 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G049800.1 ATCDSP32,... plastidial thioredoxin *(TrxL1) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g15918 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00891 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05756 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g29410.1 ATCDSP32,... Thioredoxin-like protein CDSP32, chloroplastic OS=Oryza... 0.03 OrthoFinder output from all 47 species
Len_g23803 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07920 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g19186 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07440 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g081970.3.1 ATCDSP32,... Thioredoxin-like protein CDSP32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Spa_g04933 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10153 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 205 297
IPR013766 Thioredoxin_domain 90 179
No external refs found!