1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00001p00104540

AMTR_s00001p00104540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.71

No description available


Gene families : OG0002355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002355_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00104540

Target Alias Description ECC score Gene Family Method Actions
AT2G46100 No alias Nuclear transport factor 2 (NTF2) family protein 0.04 OrthoFinder output from all 47 species
Adi_g026365 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g026366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g00887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07205.t1 Aspi01Gene07205 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G002700.1 Ceric.38G002700 not classified & original description: pacid=50580344... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.74 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g03295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026980001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_06822 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g10495.1 LOC_Os07g10495 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g22250 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002163 No alias not classified & original description: CDS=116-802 0.02 OrthoFinder output from all 47 species
Solyc01g095000.3.1 Solyc01g095000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g10818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007173_P001 Zm00001e007173 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 108 217
No external refs found!