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Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.20
Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana
Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00001p00037390 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G04480 | No alias | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... | 0.06 | OrthoFinder output from all 47 species | |
| AT4G22030 | No alias | F-box family protein with a domain of unknown function (DUF295) | 0.07 | OrthoFinder output from all 47 species | |
| Ala_g03889 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene20983.t1 | Aspi01Gene20983 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34497.t1 | Aspi01Gene34497 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene34559.t1 | Aspi01Gene34559 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0182.g056424 | No alias | not classified & original description: CDS=1-1896 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0334.g065497 | No alias | not classified & original description: CDS=1-1488 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g13201 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G060400.1 | Ceric.17G060400 | not classified & original description: pacid=50617546... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z179700.1 | Ceric.1Z179700 | not classified & original description: pacid=50596893... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g26357 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g17787 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012688001 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01012691001 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15744 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_15745 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_15746 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g13190.1 | LOC_Os02g13190 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g13220.1 | LOC_Os02g13220 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g13260.1 | LOC_Os02g13260 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g00910.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Mp5g17910.1 | No alias | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g35722 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g38437 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09104 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g080830.1.1 | Solyc02g080830 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g080840.1.1 | Solyc02g080840 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.09 | OrthoFinder output from all 47 species | |
| Solyc02g080850.1.1 | Solyc02g080850 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014444_P001 | Zm00001e014444 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014445_P001 | Zm00001e014445 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016310 | phosphorylation | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |