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  5. AMTR_s00001p00009420

AMTR_s00001p00009420 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00001.1

Description : External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.NIN transcription factor


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00001p00009420

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00148680 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AT1G64530 No alias Plant regulator RWP-RK family protein 0.03 OrthoFinder output from all 47 species
AT2G17150 No alias Plant regulator RWP-RK family protein 0.06 OrthoFinder output from all 47 species
AT4G35270 No alias Plant regulator RWP-RK family protein 0.04 OrthoFinder output from all 47 species
Adi_g057867 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21764 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60782.t1 Aspi01Gene60782 transcription factor *(NIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22670 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g32098 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g41850.1 LOC_Os04g41850 transcription factor (NLP). transcription factor (NIN) 0.04 OrthoFinder output from all 47 species
LOC_Os09g37710.2 LOC_Os09g37710 transcription factor (NLP). transcription factor (NIN) 0.03 OrthoFinder output from all 47 species
Mp8g12800.1 NLP7 transcription factor (NLP) 0.03 OrthoFinder output from all 47 species
Pir_g29547 NLP7 transcription factor *(NIN) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011741 NLP7 transcription factor *(NIN) & original description: CDS=1445-5500 0.02 OrthoFinder output from all 47 species
Sam_g22651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g112190.3.1 Solyc01g112190 transcription factor (NLP). transcription factor (NIN) 0.04 OrthoFinder output from all 47 species
Solyc08g008410.3.1 NLP7, Solyc08g008410 transcription factor (NLP). NLP6/7 nitrate response... 0.04 OrthoFinder output from all 47 species
Solyc08g082750.3.1 NLP7, Solyc08g082750 transcription factor (NLP). NLP6/7 nitrate response... 0.03 OrthoFinder output from all 47 species
Spa_g24845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53032 No alias transcription factor *(NIN) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000253_P001 Zm00001e000253 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 597 621
No external refs found!