LOC_Os09g21450.1


Description : cyclin (CYCD)


Gene families : OG_01_0000252 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000252_tree ,
OG_02_0000382 (LandPlants) Phylogenetic Tree(s): OG_02_0000382_tree ,
OG_03_0000715 (SeedPlants) Phylogenetic Tree(s): OG_03_0000715_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os09g21450.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00097010 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.07 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.03 Archaeplastida
AT3G50070 CYCD3;3 CYCLIN D3;3 0.07 Archaeplastida
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.04 Archaeplastida
AT4G37630 CYCD5;1 cyclin d5;1 0.02 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.06 Archaeplastida
GSVIVT01003674001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.09 Archaeplastida
GSVIVT01009353001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 Archaeplastida
GSVIVT01009432001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
GSVIVT01034128001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 Archaeplastida
Gb_03361 No alias cyclin (CYCD) 0.03 Archaeplastida
Gb_13023 No alias cyclin (CYCD) 0.03 Archaeplastida
LOC_Os07g37010.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_103834g0010 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_10429174g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429174g0030 No alias cyclin (CYCD) 0.03 Archaeplastida
MA_10436212g0010 No alias cyclin (CYCD) 0.04 Archaeplastida
MA_559426g0020 No alias cyclin (CYCD) 0.03 Archaeplastida
Smo15078 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
Smo412774 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
Solyc02g079370.3.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc03g006670.4.1 No alias cyclin (CYCD) 0.08 Archaeplastida
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.04 Archaeplastida
Solyc05g006050.3.1 No alias cyclin (CYCD) 0.07 Archaeplastida
Solyc07g054950.2.1 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.02 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.02 Archaeplastida
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 LandPlants
AT5G65420 CYCD4;1 CYCLIN D4;1 0.02 LandPlants
MA_10436212g0010 No alias cyclin (CYCD) 0.02 LandPlants
MA_93221g0010 No alias cyclin (CYCD) 0.02 LandPlants
Smo15078 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 LandPlants
Smo412774 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 LandPlants
Solyc05g006050.3.1 No alias cyclin (CYCD) 0.07 LandPlants
AMTR_s00135p00066200 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
GSVIVT01037810001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 SeedPlants
Gb_37608 No alias cyclin (CYCD) 0.01 SeedPlants
MA_114375g0010 No alias cyclin (CYCD) 0.01 SeedPlants
MA_93221g0010 No alias cyclin (CYCD) 0.02 SeedPlants
Solyc05g006050.3.1 No alias cyclin (CYCD) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 56 182
No external refs found!